PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028110831.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Nin-like
Protein Properties Length: 303aa    MW: 34627.2 Da    PI: 6.6664
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028110831.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK81.58.6e-26133183252
          RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     +k++s +++s+yF++pi++AAke+ v+lT+LK++CR++GI+RWPhRk+ sl
  XP_028110831.1 133 SKTLSRKTISEYFYMPITQAAKEIXVGLTLLKKRCRELGIRRWPHRKLMSL 183
                     689*********************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MRREKSLWFV KILGHIVLER GYSALDCQYD HLSMQESVVD ALPLMGIYPT HPLCSTLDLV  60
PSPSAIQEDL LFGYGNGYGV LNQEISPVGF ETEPQSQNQP LLLCDDNEET QEEFVKEKTV  120
NNKRCSEEKS NSSKTLSRKT ISEYFYMPIT QAAKEIXVGL TLLKKRCREL GIRRWPHRKL  180
MSLQTLIKNV QEMDKGQKKG AEGRLKEAID VLEQERKLME EVPDMQLEDK TKRLRQACFK  240
ASYKKRKLTG MVDSHTSSSS SSSIRTSNTN ATTLDYYGTW EDKEEEEIRS LLSGCFSCSN  300
ILL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.12e-53Nin-like family protein