PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028110705.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TCP

Protein Properties

Length: 349aa MW: 39174.6 Da PI: 7.7227

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028110705.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	146.7	1.6e-45	105	263	2	134
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...............ssssasec..eaesss 79 + kkdrhski T++g+RdRR+Rls+e+a+ fF Lqd+LGfdk+skt+eWLl+++k+aikelt++ s+ss sec s XP_028110705.1 105 TSKKDRHSKINTAQGPRDRRMRLSLEVARDFFNLQDMLGFDKASKTVEWLLTKSKAAIKELTRSlphhmkhscsvgganSASSTSECevV--SGM 197 689***********************************************************99999999888876555555666331..222 PP TCP 80 ssasnsssg..............kaaksaakskksqk.saasalnlakesrakarararertrekmrikn 134 +s+g ++a+ aak+kk+++ ++++++ lakesr+karararertr+k r + XP_028110705.1 198 D----ESAGidgnqpmrtgkaktSSASLAAKEKKAKAlRKSAFNPLAKESREKARARARERTRDKRRFGE 263 2....2222344455677888774455455444444414555677888***************98665 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MYPSNSNGNN NNSISYSLFD INPNSKQEDH PSSLFHLPSP YIHYEDDVVL LQNLHDLLLQ 60 QQQLPPTTNV DVDDNNTAAK VEAMTTTNMA ESSKQCHSVL PRKRTSKKDR HSKINTAQGP 120 RDRRMRLSLE VARDFFNLQD MLGFDKASKT VEWLLTKSKA AIKELTRSLP HHMKHSCSVG 180 GANSASSTSE CEVVSGMDES AGIDGNQPMR TGKAKTSSAS LAAKEKKAKA LRKSAFNPLA 240 KESREKARAR ARERTRDKRR FGESEQPLEA MNHDMNRLGS WSPFENGEES GVNPHLDVLA 300 DVHEELSSSM IFNYDPHNSG INSQEQQFTG FQVYGKPWEA YMYNNINLC

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MYPSNSNGNN NNSISYSLFD INPNSKQEDH PSSLFHLPSP YIHYEDDVVL LQNLHDLLLQ  60
QQQLPPTTNV DVDDNNTAAK VEAMTTTNMA ESSKQCHSVL PRKRTSKKDR HSKINTAQGP  120
RDRRMRLSLE VARDFFNLQD MLGFDKASKT VEWLLTKSKA AIKELTRSLP HHMKHSCSVG  180
GANSASSTSE CEVVSGMDES AGIDGNQPMR TGKAKTSSAS LAAKEKKAKA LRKSAFNPLA  240
KESREKARAR ARERTRDKRR FGESEQPLEA MNHDMNRLGS WSPFENGEES GVNPHLDVLA  300
DVHEELSSSM IFNYDPHNSG INSQEQQFTG FQVYGKPWEA YMYNNINLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	2e-28	TCP family protein