PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028110499.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 183aa MW: 20635.4 Da PI: 8.4064 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.3 | 7.5e-18 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++l+d+++ +G g+W+t ++ g++R++k+c++rw +yl XP_028110499.1 13 KGAWTKQEDQKLIDYIQTHGEGCWRTLPKAAGLHRCGKSCRLRWINYL 60 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.4 | 2.5e-16 | 67 | 111 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g++ ++E++l+++++++lG++ W++I+ +++ gRt++++k++w+++l XP_028110499.1 67 GNFGQDEEDLIIKLHALLGNR-WSLISGRLP-GRTDNEVKNYWNTHL 111 7899*****************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MRKPCCDKQD TNKGAWTKQE DQKLIDYIQT HGEGCWRTLP KAAGLHRCGK SCRLRWINYL 60 RPDIKHGNFG QDEEDLIIKL HALLGNRWSL ISGRLPGRTD NEVKNYWNTH LKRKLIRVGI 120 DPDNHRLNQT LPRLQNQCMS TLVTSSGSDA ASCLEDDTST SCGLSLDLSI AIPSPSPVLE 180 GEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22640.1 | 1e-74 | MYB family protein |