PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028110065.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | Trihelix | ||||||||
Protein Properties | Length: 402aa MW: 46302.3 Da PI: 4.2792 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 49 | 1.6e-15 | 170 | 254 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt++e+ +L++a ++ + +r++l+ W+ev++k+ +e ++er +qC+++++ l+k+ykk+k + +++s+++yf++++ XP_028110065.1 170 WTEHETFVLLDAWGDRFLKRGRKSLRSDEWQEVAEKVtQESKIERADTQCRNRLDTLKKKYKKEKIKLAES-RDTTSKWVYFRKMD 254 *************************************88999*************************9996.67777********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 402 aa Download sequence |
MGDTDDDARY PPIPYGVTQG YGSAQRLKLP IRSSSYPRQV GNQYVNVDDD DDDNEEVDEA 60 EEVDEEEEEE EEEENDDNED NANRQMVKVE NVDDDDNDDD GDDETEDEDG DEQNGYSVRI 120 GDVDLERHQK KRKVKSLSSY EFAPRVAASP MATASTSKPS FGGRNPLADW TEHETFVLLD 180 AWGDRFLKRG RKSLRSDEWQ EVAEKVTQES KIERADTQCR NRLDTLKKKY KKEKIKLAES 240 RDTTSKWVYF RKMDMLMSPA PKQPGLSCGV DSGEFVFMNP KVYLNRANGL DEMRDSPGNS 300 GSAEEEDSDE LPPKRTRMGK ERDDGASFRL LADSIHKFSE IYEKIENSKR QQMLELEKMR 360 MDFHRELESQ RRQILERTQA EIEKIRQGDN EENDLSAENI SG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 188 | 232 | KRGRKSLRSDEWQEVAEKVTQESKIERADTQCRNRLDTLKKKYKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24490.1 | 2e-73 | Trihelix family protein |