PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028109480.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family GATA
Protein Properties Length: 335aa    MW: 36157.6 Da    PI: 6.6152
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028109480.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.11e-17244277134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  XP_028109480.1 244 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 277
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    
MMGSDYIDEI DCGSFFDQID DIIEFPTDNE CGLGSGGCAD FPSIWSNPAD ALPGSGQIFS  60
GNNSSNAASV LAAELSVPYE DIVQLEWLSN FVEDSFSGGG MTLDKENAFI KKETASHNQF  120
QTSSPVSVLE SSSSSSSCSG GKSMSLSPTQ RGPQRARSKR PRPATFNPRP AIQLISPTSS  180
ITENPQSFPV PVAASELENF AESHPIKKIP KASGAEHKKK KIKLSLPLGP VEMNQNPPSH  240
VRKCMHCEIT KTPQWRAGPM GPKTLCNACG VRYKSGRLFP EYRPAASPTF VPSLHSNSHK  300
KVLEMRNNGC DKTSDVMTTA QAELVPNTNP SLDYV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1159163KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.23e-42GATA family protein