PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028109158.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 210aa MW: 24148.3 Da PI: 8.2015 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60 | 3.8e-19 | 53 | 105 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++++q++ Le F +++++ e++ +LA++lgL+ rqV vWFqNrRa++k XP_028109158.1 53 KRKLSEQQVNLLELSFGNEHKLESERKDKLASELGLDPRQVAVWFQNRRARWK 105 45899***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 118.4 | 3.9e-38 | 52 | 143 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +kr+ls++qv+lLE sF +e+kLe+erK +la+eLgl+prqvavWFqnrRAR+k k+lE +y++Lk+++d+++ e+++Le++v +L+e+l+e XP_028109158.1 52 RKRKLSEQQVNLLELSFGNEHKLESERKDKLASELGLDPRQVAVWFQNRRARWKIKKLEDEYSKLKTEHDSVVVEKCQLETQVLTLKEQLSE 143 8****************************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MNPQVEDQMV LTSQFYPGIY NQLVPQQEEA KPRRRRRRKS KGEAGSDGGG ARKRKLSEQQ 60 VNLLELSFGN EHKLESERKD KLASELGLDP RQVAVWFQNR RARWKIKKLE DEYSKLKTEH 120 DSVVVEKCQL ETQVLTLKEQ LSEAEKETQK LLERCDGISS NSPRSSFSME AMGPPFLGAF 180 GMQGLESVFY VPENNYIHGM EWVNNLNGIM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 33 | 38 | RRRRRR |
2 | 33 | 39 | RRRRRRK |
3 | 33 | 55 | RRRRRRKSKGEAGSDGGGARKRK |
4 | 34 | 56 | RRRRRRKSKGEAGSDGGGARKRK |
5 | 35 | 57 | RRRRRRKSKGEAGSDGGGARKRK |
6 | 36 | 41 | RRRKSK |
7 | 36 | 58 | RRRRRRKSKGEAGSDGGGARKRK |
8 | 37 | 59 | RRRRRRKSKGEAGSDGGGARKRK |
9 | 52 | 81 | RKRKLSEQQVNLLELSFGNEHKLESERKDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36740.1 | 8e-71 | HD-ZIP family protein |