PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028108592.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 269aa    MW: 30843.1 Da    PI: 5.4608
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028108592.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.22.4e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd +l  +++++G  +W+  ++  g+ R++k+c++rw +yl
   XP_028108592.1 14 KGAWSPEEDNKLRAYIQRYGHWNWRELPKFAGLSRCGKSCRLRWMNYL 61
                     79******************99************************97 PP
2Myb_DNA-binding57.33.7e-1867112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ T+eE+++++++++ lG++ W++Ia++++ gRt++++k++w+++l
   XP_028108592.1  67 RGNYTKEEEDIIIKLHEALGNK-WSAIAAKLP-GRTDNEIKNHWHTHL 112
                      899*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MVRTPCFDNN GRKKGAWSPE EDNKLRAYIQ RYGHWNWREL PKFAGLSRCG KSCRLRWMNY  60
LRPNVKRGNY TKEEEDIIIK LHEALGNKWS AIAAKLPGRT DNEIKNHWHT HLKKRSKQNK  120
SAKIKNQSTG TDSDRSESKA DHRERSTEML KCEANQEVES DDQPCPILES SALFQEPSSS  180
EISSLSSDYA MLSGGVNRAL EDSLSSLDSF AEPIENFWTQ PFLADTYCDD ENNFSSNFVE  240
GGFVSPFDSY YDDDSMDFLS QVLQELPKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.11e-61MYB family protein