PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028108263.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family TCP
Protein Properties Length: 307aa    MW: 34651.3 Da    PI: 10.2083
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028108263.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1441.1e-44932422133
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......ssssaseceaesssssasnsssg. 88 
                     agkkdrhski T++g+RdRRvRls+++a +fF Lqd+LGfdk+sk+++WLl+++k+ai e            ss+ sece++s   +++++ +g 
  XP_028108263.1  93 AGKKDRHSKIRTARGLRDRRVRLSIDIASKFFGLQDMLGFDKPSKALDWLLTKSKTAINEVKLMqkkhsllMSSPTSECEQVSGGTNENSDDNGg 187
                     89*********************************************************988885566666444447884444433333333336 PP

             TCP  89 ..........kaaksaakskksqksaasalnlakesrakarararertrekmrik 133
                                 + ++ k+ ++q++ a+++ l++esra arararertrekm+++
  XP_028108263.1 188 ikdtvskikpLMNVEKDKKVQQQQHRAAFHLLSRESRAMARARARERTREKMCTR 242
                     7799999998444444455556666666999999*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MFSSNNSCTN PFPPSFHHHL SPPHFVGHDG PDIFLLHHHH HHPDPLLGDW LWDNFPVIDT  60
ISSSTIAASK QETTVHHCSS FPPPQNVLPR KRAGKKDRHS KIRTARGLRD RRVRLSIDIA  120
SKFFGLQDML GFDKPSKALD WLLTKSKTAI NEVKLMQKKH SLLMSSPTSE CEQVSGGTNE  180
NSDDNGGIKD TVSKIKPLMN VEKDKKVQQQ QHRAAFHLLS RESRAMARAR ARERTREKMC  240
TRRLNDPKEV VNDSSPPILN RSTCLSQIEA YKGMDSNNHM VLRSGLTEDS VVKPSSVFNG  300
QKDVSYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67260.25e-25TCP family protein