PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028107419.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 332aa MW: 36958.4 Da PI: 4.989 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.5 | 8.8e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++ + G +W++ ++ g+ R++k+c++rw +yl XP_028107419.1 14 KGPWTAEEDKKLINFILTNGQCCWRSLPKLAGLLRCGKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 49.7 | 8.2e-16 | 71 | 111 | 5 | 47 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++ E+ +d+++qlG++ W++Ia++++ gRt++++k++w+++ XP_028107419.1 71 SEYEETMVIDLHAQLGNR-WSKIASHLP-GRTDNEIKNHWNTH 111 6679999***********.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence |
MGRQPCCEKV GLKKGPWTAE EDKKLINFIL TNGQCCWRSL PKLAGLLRCG KSCRLRWTNY 60 LRPDLKRGLL SEYEETMVID LHAQLGNRWS KIASHLPGRT DNEIKNHWNT HIKKKLRKMG 120 IDPLTHKPLP TTPTHDHQFQ QQPHDQQQEQ SLPEPVPSLS EVGQNKEIET ILFESSITDT 180 EAKEEGPFNS MEVNNGFSTD EVPLIEPHEI NLVPCVPSVP LIEPHDINLV PCVPSSSSPS 240 SSSTITSSSS SSSSSSSSSS SSSSSSHFSS SNILEELELP TFEWGMGFWD DDFSNALDLL 300 ISGADNWNAT VEPLPPPTPT QYPTRMVLDQ ES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66230.1 | 5e-84 | MYB family protein |