PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028107198.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Trihelix
Protein Properties Length: 263aa    MW: 30253.1 Da    PI: 7.4123
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028107198.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix49.51.1e-1523113186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W+++ + +L++a  ++  +l+rg+l++++W+ev++++     + ++ +r+ +qCk++++ l+k+yk +k++ ++ +  + s++++f +l+
  XP_028107198.1  23 CWSEEATSTLVDAWGRRYLELNRGNLRQKDWQEVADAVnlrhgHTKKTRRTDVQCKNRIDTLKKKYKVEKARVSESNGSVASSWSFFPRLD 113
                     7**************************************999999999************************9999999999******997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MDELQFSTPQ PPPARSLPFR EDCWSEEATS TLVDAWGRRY LELNRGNLRQ KDWQEVADAV  60
NLRHGHTKKT RRTDVQCKNR IDTLKKKYKV EKARVSESNG SVASSWSFFP RLDYLIGSTA  120
KKAPSPPLAV PLVYRKPPPG LVVQPVVLPQ KRPSPAVDDS YFRRNYSAVA AAAAAEEEEE  180
TEEEGDEDEV EGMSRLARAI ERFGEMYERI EGEKQRQMIE LEKQRMQFAK DLEVQRMQLF  240
MDTQVQLEKI KQAKRSGSND IYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11100.16e-51Trihelix family protein