PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028107196.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | Trihelix | ||||||||
Protein Properties | Length: 281aa MW: 31818.1 Da PI: 9.3583 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 48.5 | 2.3e-15 | 23 | 113 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+++ + +L++a ++ +l+rg+l++++W+ev++++ + ++ +r+ +qCk++++ l+k+yk +k++ ++ + ++s++++f++l+ XP_028107196.1 23 CWSEEATSTLVDAWGRRYLELNRGNLRQKDWQEVADAVnlrhgHTKKARRTDVQCKNRIDTLKKKYKVEKARVSESNGSVTSSWSFFSRLD 113 7**************************************9998888999***********************9999999999******997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 281 aa Download sequence |
MAELQFSTPQ PPPSRPLPFR EDCWSEEATS TLVDAWGRRY LELNRGNLRQ KDWQEVADAV 60 NLRHGHTKKA RRTDVQCKNR IDTLKKKYKV EKARVSESNG SVTSSWSFFS RLDCLIGSAV 120 TAAKKAPIPI PLPPPLAVPL ACRKPPGGMV VQPVVLPQKR PSPAVDDSYF RRNYSAVAAA 180 AAAEEEEEDR SEDLGSSEET GGRRNGEAEG MRRLARAIEK LGEMYERIEG EKQRQMIELE 240 KQRMQFAKDL EVQRMQLFMD TQVQLEKIKQ AKRSGSNDIY S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58630.1 | 1e-62 | Trihelix family protein |