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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028106736.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | AP2 | ||||||||
Protein Properties | Length: 473aa MW: 52472.9 Da PI: 7.7574 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.3 | 3.3e-17 | 155 | 204 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_028106736.1 155 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 204 78*******************......55************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 473 aa Download sequence |
MLDLNVDSSC NEVEATKITK LPRSDDCSGT SISSIVNNNT PDEDSTSNPP SSSVCSFNFD 60 IFSSKAKDPS IIIAIQDDSD ENSPPQFVTR QFFPSGHSDE FDSRSSSLRP PQCVNLSFSD 120 SGGVPELTNF QQQQHKQPQQ QQVKKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV 180 YLGGFDTAHA AARAYDRAAI KFRGLDADIN FSLSNYEEDM KQMTNLTKEE FVQILRRRST 240 GFSRGSSKYR GVTLHKCGRW EARMGQFLGK KAYDKAAIKC NGREAITNFE ASTYEGEISF 300 DTNIPDGSTA QNLDLNLWIS APTDVPKGND NVRNFQSQYA ACEMPDGKRP KVETSVSSPI 360 DGRNIQGLTM ASKNSSVWSG NHPSFTPNYE ERALGKVTEA IPSPAFPNWA WKMQNQSVDS 420 PVALFSAAAS SGFPPSTPTT TLSATLAPQN LQNITPYFPT QTTNISHFYN HKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.1 | 3e-78 | AP2 family protein |