PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028105128.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 320aa    MW: 36062.3 Da    PI: 7.031
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028105128.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.63.8e-151462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     rg+W++eEd +l++   ++G+g +W + +++ g++R++k+c++rw++yl
   XP_028105128.1 14 RGPWSPEEDTKLKEFMDKYGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62
                     89*********************************************97 PP
2Myb_DNA-binding41.43.4e-1369111246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g ++ eEd ++  +++  G++ W+ Ia++++ gRt++++k++w++
   XP_028105128.1  69 GEFSDEEDRIICTLFANIGSR-WSIIASHLP-GRTDNDIKNYWNT 111
                      789******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MGRAPCCDKA NVKRGPWSPE EDTKLKEFMD KYGTGGNWIA LPQKAGLKRC GKSCRLRWLN  60
YLRPNIKHGE FSDEEDRIIC TLFANIGSRW SIIASHLPGR TDNDIKNYWN TKLKRKLMGL  120
LLPSNHHHHR KPPPYPPPPP LQPPHSQLPS LSPPPPPLPL YNYNPIITGL HDQPNLMNNN  180
NNNNNNYYNS SLLQIQSQES LFSPMQYYSV FGGDQASCSS SDGSCSQISI KQEDMVLQSY  240
MSSSNGHLEE DQKFMAGTDD YGNNGGDNDI FGTWTDQKPN GYFGNSSSSI PPLEYDLEEV  300
KQLISNGNGI SCHDWLFRSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36890.11e-75MYB family protein