PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028104611.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 886aa MW: 98957.2 Da PI: 6.3871

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028104611.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	50.2	4.9e-16	376	418	4	46
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPh 46 i+++dl+++F + +d+A++ gv+++++KriCR++GI+RWP+ XP_028104611.1 376 VITQKDLEQNFGRSREDVANSFGVSVSTMKRICRKHGISRWPF 418 599***************************************7 PP
2	RWP-RK	62.2	8.7e-20	520	567	3	50
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50 + +s+edl+ +F+ + +AAk Lgv+++++KriCRq+GI+RWP+Rk k XP_028104611.1 520 SVLSFEDLQPHFDCKRDNAAKALGVSVSTVKRICRQHGISRWPSRKKK 567 5699******************************************76 PP

Sequence ? help Back to Top
Protein Sequence Length: 886 aa Download sequence
MGEEEEEQIL ERLRNQPIYS PPPPSPSSGE VFLISPQFFF SQPPPLSPQL HFSPPPTASV 60 LMSPYLDFSP PPPLSPQLHF SPPPTASVLM SPYLDFSPPP VMPTLEYALQ NVRGLKGQIE 120 WVPGIQKLSV FTLTDTRYLR LIILKVAVDV CDGIHKLDLW FQPYPQTQRV RSSPWRIVLT 180 DKGDMGQCHS SKPLKRSLED SPQDFGGALD VIPKFIDQIP WWWRRLLKLE SGCDEEPDDF 240 EEMTQTLVLE SIPLVFFLPP KSPKMVPIWS CLSVVKISRK ISIRLLQVLP SVQLPQTLHI 300 VIVEEKMTQL LSCSGEFISQ DSSLVEERSV EITVEVDATN NGAHGVKAYG NFPIVSHSEN 360 KNTRDKLKRN YKSISVITQK DLEQNFGRSR EDVANSFGVS VSTMKRICRK HGISRWPFQP 420 ERKKERSMEV ISPSMHEKHD SRLRCIRTPL HVRSSPRTID LLDGGEMVQL DSSKQQSLVE 480 FDVTNNSAHL VRASQSCSTI SHSDETNSRE TLKRKCTSKS VLSFEDLQPH FDCKRDNAAK 540 ALGVSVSTVK RICRQHGISR WPSRKKKNVS KTDYRLVEPQ GEKDVSPTCS KMPTDGQTER 600 GNEMVGHLQD QNKGLNLSNT ENGSIPVFEM DSILLGLEGE KNVSPTYKTP TVGIVLDCKE 660 VPNLSNIENH SNEESTTASI FQDSVPVFER DCVLHEPQGE KNESPTHKTP TNGQTEVGNG 720 MVGHIQDQNG IVLEFIKGPN LLNAENCSNE KSLTIPNFQD SVPGTYPAMD SSISSIYRES 780 GEAGGSSELA FQPNELIPSM AYPNPNACVH TEPHISLTEM PIENVGSSRD SRNFSTSAVG 840 IFMGGHVSES SWTMPLPSNL APMQTMATIP HTMQHHRKAI YNNCDV

Sequence ? help Back to Top

Protein Sequence Length: 886 aa Download sequence

MGEEEEEQIL ERLRNQPIYS PPPPSPSSGE VFLISPQFFF SQPPPLSPQL HFSPPPTASV  60
LMSPYLDFSP PPPLSPQLHF SPPPTASVLM SPYLDFSPPP VMPTLEYALQ NVRGLKGQIE  120
WVPGIQKLSV FTLTDTRYLR LIILKVAVDV CDGIHKLDLW FQPYPQTQRV RSSPWRIVLT  180
DKGDMGQCHS SKPLKRSLED SPQDFGGALD VIPKFIDQIP WWWRRLLKLE SGCDEEPDDF  240
EEMTQTLVLE SIPLVFFLPP KSPKMVPIWS CLSVVKISRK ISIRLLQVLP SVQLPQTLHI  300
VIVEEKMTQL LSCSGEFISQ DSSLVEERSV EITVEVDATN NGAHGVKAYG NFPIVSHSEN  360
KNTRDKLKRN YKSISVITQK DLEQNFGRSR EDVANSFGVS VSTMKRICRK HGISRWPFQP  420
ERKKERSMEV ISPSMHEKHD SRLRCIRTPL HVRSSPRTID LLDGGEMVQL DSSKQQSLVE  480
FDVTNNSAHL VRASQSCSTI SHSDETNSRE TLKRKCTSKS VLSFEDLQPH FDCKRDNAAK  540
ALGVSVSTVK RICRQHGISR WPSRKKKNVS KTDYRLVEPQ GEKDVSPTCS KMPTDGQTER  600
GNEMVGHLQD QNKGLNLSNT ENGSIPVFEM DSILLGLEGE KNVSPTYKTP TVGIVLDCKE  660
VPNLSNIENH SNEESTTASI FQDSVPVFER DCVLHEPQGE KNESPTHKTP TNGQTEVGNG  720
MVGHIQDQNG IVLEFIKGPN LLNAENCSNE KSLTIPNFQD SVPGTYPAMD SSISSIYRES  780
GEAGGSSELA FQPNELIPSM AYPNPNACVH TEPHISLTEM PIENVGSSRD SRNFSTSAVG  840
IFMGGHVSES SWTMPLPSNL APMQTMATIP HTMQHHRKAI YNNCDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	3e-12	Nin-like family protein