PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028103777.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 278aa MW: 31888.5 Da PI: 6.4232 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 41.8 | 2.4e-13 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W+++Ed++l ++ G g+W++I+ g+ R +k+c++rw +yl XP_028103777.1 16 KGLWSPDEDQRLRTYILNNGHGCWSSIPINAGLERNGKSCRLRWINYL 63 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.4 | 2.2e-15 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +T+ E+e ++ ++ +lG++ W+ Ia+++ gRt++++k++w++yl XP_028103777.1 69 RGMFTAHEEETILSLHGMLGNK-WSQIAQHLS-GRTDNEIKNYWHSYL 114 789*******************.*********.************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 278 aa Download sequence |
MGYKAVDQKQ KQKHRKGLWS PDEDQRLRTY ILNNGHGCWS SIPINAGLER NGKSCRLRWI 60 NYLRPGLKRG MFTAHEEETI LSLHGMLGNK WSQIAQHLSG RTDNEIKNYW HSYLKKKKMA 120 KIEQTKPHTE PEYTNPNTGN TQSSLSSLKS TTRNLSFESF DNMEGTSMET NESISQLPKL 180 LFAEWLSLDQ FQGQDLTNSG RPAVSKDDPN YQYSFLNCLL MNEGAFGGKF HQELSNGSGT 240 ADEMSNPQFK SEEEDQFVNF ITEDDMCSHF NMDSDVFM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G48920.1 | 3e-60 | MYB family protein |