PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028103605.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 254aa MW: 28360.8 Da PI: 7.6279 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.2 | 7.9e-20 | 90 | 144 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++t+eq ++Lee F+ n+ ++ +++e+LA++l+L+ rqV vWFqNrRa+ k XP_028103605.1 90 RKKLRLTTEQSRILEETFRFNHSLNPKQKEDLAMQLKLKARQVEVWFQNRRARSK 144 78889************************************************98 PP | |||||||
2 | HD-ZIP_I/II | 111.1 | 7.3e-36 | 90 | 178 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rl++eq+++LEe+F+ ++ L+p++K++la +L+l++rqv+vWFqnrRAR k+kq+E ++e+Lkr++ +l+e+n+rL+keveeLr + XP_028103605.1 90 RKKLRLTTEQSRILEETFRFNHSLNPKQKEDLAMQLKLKARQVEVWFQNRRARSKLKQTEIECEYLKRWFGSLREQNRRLQKEVEELR-A 178 69*************************************************************************************9.4 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
MSVLPTSSTC LELAMSIPGF VSSQSLPSSG DHTGNGNSMR MMMKDLDINQ VPRDSGGGGG 60 GGEEEWTTTV ASMEDEEEET NNDGASGPPR KKLRLTTEQS RILEETFRFN HSLNPKQKED 120 LAMQLKLKAR QVEVWFQNRR ARSKLKQTEI ECEYLKRWFG SLREQNRRLQ KEVEELRAIK 180 VGRCDEPLHS ASTLTMCPSC EQVAAATSTT MHDIDKGPIR TTASATNQTS LSSKVHTIHN 240 HSRHPSAAFP HKIH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 139 | 147 | RRARSKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01430.1 | 3e-69 | HD-ZIP family protein |