PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028102768.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Trihelix

Protein Properties

Length: 385aa MW: 42818.4 Da PI: 9.301

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028102768.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	58.8	1.4e-18	18	107	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +Wt++e+laLi+++re++ +lrrg l+ ++W++v++++ + ++++ qC++k+e+l+++y+ +k+++ + + s++ +fd+++ XP_028102768.1 18 CWTQEETLALIDVYRERWYALRRGYLRTADWDAVAAAVvtrcPDASPSKTSAQCRHKMEKLRQKYRTEKQRSLSFPGRFFSSWFFFDNMD 107 8*********************************998888788889999******************99889999****998 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MSMTTTEKKP PRKFPPPCWT QEETLALIDV YRERWYALRR GYLRTADWDA VAAAVVTRCP 60 DASPSKTSAQ CRHKMEKLRQ KYRTEKQRSL SFPGRFFSSW FFFDNMDSMS LPLGSNQNVI 120 NRIESGVESV KKIDGNSSSN LGLGEDGVGV DRNSVILGLR AKNCSKIDAN SNPNCGSTVL 180 NGHSSYLDEG SDEDVGEDTD FQGPIRSKKF EKIHGNFAPN FDSDGGFYIK TPMDQDLVPP 240 GFRAKKFNDR YSIPTGIRSK SSGKTDGNSC PNLDSRFVNG NGFSSTFGLG LGLGKKTGGD 300 GRGVKRERGE IAEMASAIKV LGEGFVKMEK MKMEMAGEIE KMRMEMEMKR NELILESQRQ 360 IVDAFVTVLQ ENKKKKANTT PSPES

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MSMTTTEKKP PRKFPPPCWT QEETLALIDV YRERWYALRR GYLRTADWDA VAAAVVTRCP  60
DASPSKTSAQ CRHKMEKLRQ KYRTEKQRSL SFPGRFFSSW FFFDNMDSMS LPLGSNQNVI  120
NRIESGVESV KKIDGNSSSN LGLGEDGVGV DRNSVILGLR AKNCSKIDAN SNPNCGSTVL  180
NGHSSYLDEG SDEDVGEDTD FQGPIRSKKF EKIHGNFAPN FDSDGGFYIK TPMDQDLVPP  240
GFRAKKFNDR YSIPTGIRSK SSGKTDGNSC PNLDSRFVNG NGFSSTFGLG LGLGKKTGGD  300
GRGVKRERGE IAEMASAIKV LGEGFVKMEK MKMEMAGEIE KMRMEMEMKR NELILESQRQ  360
IVDAFVTVLQ ENKKKKANTT PSPES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	2e-27	Trihelix family protein