PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028102715.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 320aa    MW: 35810.8 Da    PI: 4.7522
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028102715.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.93.1e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l++ +   G  +W+++++  g+ R++k+c++rw +yl
   XP_028102715.1 14 KGPWTAEEDKKLINFILSNGQCCWRAVPKLSGLLRCGKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding50.64.5e-1673111747
                      HHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   7 eEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       E++  +d+++qlG++ W++Ia++++ gRt++++k++w+++
   XP_028102715.1  73 YEEKMVIDLHAQLGNR-WSKIASHLP-GRTDNEIKNHWNTH 111
                      599*************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MGRQPCCDKV GLKKGPWTAE EDKKLINFIL SNGQCCWRAV PKLSGLLRCG KSCRLRWTNY  60
LRPDLKRGLL SDYEEKMVID LHAQLGNRWS KIASHLPGRT DNEIKNHWNT HIKKKLRKMG  120
IDPLTHKPLP TPPTDHDQPQ QERPQEDQQP PLPSLTCKIS EVAVGQNSEI ETSFESSITE  180
EAKHKEKEED INIEGPFDSL MDVNNGFCTD DIPLIEPHEI NLLPPCTTAP SISSTTTTSS  240
SSTSSSSASS SSSSYSSSNN NILEDLDLLP NFDSWQSDLS NSLVFWDDDD FISTFDLWIN  300
GGDSDRNLSS TVDDHPPTTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66230.13e-85MYB family protein