PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028102645.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Trihelix

Protein Properties

Length: 294aa MW: 33918.3 Da PI: 5.3717

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028102645.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	38.3	3.6e-12	30	106	2	79
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 W+ qe l+Li+ +e++ r++ + ++W+ + +++ + + r+ +qC+ kw++l +ykkik +e+++ s+++s + XP_028102645.1 30 WSSQESLTLITEIAAVERDCRNTLSSFQKWKIIVENCNSLEVFRTLNQCRRKWDSLLSDYKKIKLWESSE-SRVESYW 106 ********************************************************************96.6666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MSMDEQEDYG GSHSRASASR RTRSQVAPDW SSQESLTLIT EIAAVERDCR NTLSSFQKWK 60 IIVENCNSLE VFRTLNQCRR KWDSLLSDYK KIKLWESSES RVESYWSIDY ERRCEFGFPE 120 DFDFEVFKAI DDHLKVGDGS DTDPDVDPEA VADGVAEPDL KKQRRRVMPQ KRSTEERLTP 180 QKRKINKKIM PEQGRVEKRV KPLKHSKDEK ILLKNNMEEK EQMMAAKLYE NAKLITDILK 240 GVLGESSDCL LADLKNVKDS QTDFTRHQGD RLITCLGNLA DTLDQLCDIV QDCG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	2e-54	Trihelix family protein