PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028102580.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 229aa MW: 25772.2 Da PI: 8.5112 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 48.1 | 2e-15 | 50 | 103 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe + + e++ +LA+ gL+ rq+ +WFqNrRa++k XP_028102580.1 50 KKRRLNLEQVKTLEKNFELGNMLESERKMQLARAPGLQPRQIAMWFQNRRARWK 103 4557899**********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 117.5 | 7.7e-38 | 49 | 139 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+ eqvk+LE++Fe + Le+erK++lar+ glqprq+a+WFqnrRAR+ktkqlEkdy++Lkr++d +k++n++L++++++ ++e+ XP_028102580.1 49 EKKRRLNLEQVKTLEKNFELGNMLESERKMQLARAPGLQPRQIAMWFQNRRARWKTKQLEKDYDVLKRQFDVIKADNDALQSQNQKFQAEV 139 69************************************************************************************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MPAIFTGMLG GVASLLGKRS MSFLAIEVCD HETNGVEDDL SDDGSQAGEK KRRLNLEQVK 60 TLEKNFELGN MLESERKMQL ARAPGLQPRQ IAMWFQNRRA RWKTKQLEKD YDVLKRQFDV 120 IKADNDALQS QNQKFQAEVL ALKNREPTES INLNKETEGS SSNRSENSSE INLDISTRTP 180 PAMDSPLSNH HHGHPIIPTS SSRPLFPPSI ITRPTSAVVA HLFFFIKTT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 98 | 106 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69780.1 | 2e-80 | HD-ZIP family protein |