PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028102463.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | Trihelix | ||||||||
Protein Properties | Length: 208aa MW: 24414.3 Da PI: 8.0718 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 40.9 | 5.4e-13 | 30 | 107 | 2 | 80 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcp 80 W+ qe l+Li+ +e++ r++ ++W+ + +++ + + r+ +qC+ kw++l +ykkik +e+++ s+++s ++ XP_028102463.1 30 WSSQESLTLITEIAAVEHDCRNTLFSFQKWKIIVENCNSLEVFRTLNQCRRKWDSLLSDYKKIKLWESSE-SQVESYWS 107 ********************************************************************96.66666665 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 208 aa Download sequence |
MSMDEQEDHG GRHSRASASR RTRSQVAPDW SSQESLTLIT EIAAVEHDCR NTLFSFQKWK 60 IIVENCNSLE VFRTLNQCRR KWDSLLSDYK KIKLWESSES QVESYWSIDY ERRREFGFPE 120 DFDFEVFKAI DDHLKVGDGS DTDPDVDPEA VADGVAKPDL KKQRRRVMPQ KRSTEERVTP 180 QKRKINKKIM PEQGRVEKKG KAFETQQR |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 161 | 201 | KKQRRRVMPQKRSTEERVTPQKRKINKKIMPEQGRVEKKGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G31270.1 | 4e-46 | Trihelix family protein |