PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028102234.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 668aa MW: 76204.8 Da PI: 6.2085

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028102234.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	45.6	1.4e-14	490	534	4	48
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 ei l+d+ ++ +++i++AA +L+v+ ++LKr CR yG +RWP Rk XP_028102234.1 490 EIPLDDILQNSKKSIQAAADDLKVSRSTLKRVCRGYGFPRWPPRK 534 688999**************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 668 aa Download sequence
MADPDDEGRV AAYFPDDFKQ YVDTQLNRCP VVDDDYWNRF CGWVFWSRED DQSEHPPNIL 60 DLKKKIKDLL RKCLLDLFID PALLQFWAPT MTMEGRSYLT TQNQPFALSA SVTRIDGVKG 120 VCGYRMISMD YKFYMDRESS DEQLGVPGRV FNHGFPEFSP NVEYYSIKEY PLRDHALLCQ 180 IEQSWAIPVF DPSPYLCVGV LEIVSTAPCS IDFVGLNNYL ENVRRWEALD EINKVLKVVR 240 EDHGLHLAQV WAPCVVDCIC RALGKGDIFH VISNFNDINE YYKFVAVNKV SDLRKWQGVV 300 GRAFSSPNVL FCKDVTQLSI IDYPLAHYAR YHKLGCCFAI CLQSSCTGND IYVLECFMPP 360 SNRDYYGNQQ TALRKILETM KKNFHSFKLA SGEELGGHLY IEEIPFQNGE KLDSVQMSQT 420 TKSLPMLEPL QSGREMIQLD LSNQQSMDAL NNESNVVSAE RSNIDVTCSQ EKGKTKRPKR 480 VHNKTGVKIE IPLDDILQNS KKSIQAAADD LKVSRSTLKR VCRGYGFPRW PPRKKNMVGQ 540 SQPSESSRGV DHQQISQLSF DLPFNQASTT VVHANPHNIA IEDANIVTMR AKYINDITIK 600 FRLSLSSSLV ELQQQIAKRL HLEAGSYYVK YKDEEDHVIL IACDDDLQDC ISTYRLLGTS 660 FVVLIDPK

Sequence ? help Back to Top

Protein Sequence Length: 668 aa Download sequence

MADPDDEGRV AAYFPDDFKQ YVDTQLNRCP VVDDDYWNRF CGWVFWSRED DQSEHPPNIL  60
DLKKKIKDLL RKCLLDLFID PALLQFWAPT MTMEGRSYLT TQNQPFALSA SVTRIDGVKG  120
VCGYRMISMD YKFYMDRESS DEQLGVPGRV FNHGFPEFSP NVEYYSIKEY PLRDHALLCQ  180
IEQSWAIPVF DPSPYLCVGV LEIVSTAPCS IDFVGLNNYL ENVRRWEALD EINKVLKVVR  240
EDHGLHLAQV WAPCVVDCIC RALGKGDIFH VISNFNDINE YYKFVAVNKV SDLRKWQGVV  300
GRAFSSPNVL FCKDVTQLSI IDYPLAHYAR YHKLGCCFAI CLQSSCTGND IYVLECFMPP  360
SNRDYYGNQQ TALRKILETM KKNFHSFKLA SGEELGGHLY IEEIPFQNGE KLDSVQMSQT  420
TKSLPMLEPL QSGREMIQLD LSNQQSMDAL NNESNVVSAE RSNIDVTCSQ EKGKTKRPKR  480
VHNKTGVKIE IPLDDILQNS KKSIQAAADD LKVSRSTLKR VCRGYGFPRW PPRKKNMVGQ  540
SQPSESSRGV DHQQISQLSF DLPFNQASTT VVHANPHNIA IEDANIVTMR AKYINDITIK  600
FRLSLSSSLV ELQQQIAKRL HLEAGSYYVK YKDEEDHVIL IACDDDLQDC ISTYRLLGTS  660
FVVLIDPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	1e-75	Nin-like family protein