PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028100462.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | WRKY | ||||||||
Protein Properties | Length: 322aa MW: 35693.6 Da PI: 6.8496 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 107.7 | 5.6e-34 | 177 | 234 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt+++C+vkk+vers +dp++v++tYeg+Hnh+ XP_028100462.1 177 EDGYRWRKYGQKAVKNSPFPRSYYRCTTQKCTVKKRVERSFQDPSTVITTYEGQHNHQ 234 8********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
MSDEPGGFYY HDPFHDDRYA TGATAFSFST STNSSLYNSP SHDLHGLGSS HMSFTESLHG 60 STDYNTIETA FGLSPPSSQL FSVVKEEQKP LVMDGGDTVV GVGETAVTPN SSISSSSTEA 120 GGDEDTSKSK KDRLQKEVED GGGESSKKVN KSKKKVEKIK REPRFAFMTK SEVDHLEDGY 180 RWRKYGQKAV KNSPFPRSYY RCTTQKCTVK KRVERSFQDP STVITTYEGQ HNHQIPATLR 240 GNAAGVMLPP SMLTMTPPLI AGTGFPQEFI VQMAPMYNHG GMSSFYPQSS NLTPLHHQQL 300 QHPDDYGLLQ DMFPSTFFKQ EP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18170.1 | 1e-59 | WRKY family protein |