PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028100329.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 312aa    MW: 34406.1 Da    PI: 5.8142
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028100329.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding322.9e-105699344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WT e d+ + +a + +  +   +W+++a++++ g+t +++k+++
   XP_028100329.1 56 SWTREQDKAFENALAIFSEEssdRWEKVAAMVP-GKTVEEIKHHY 99
                     7*****************99*************.**********9 PP
2Myb_DNA-binding43.38.7e-14163207347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + +++G+g+Wk I+r +   Rt+ q+ s+ qky
   XP_028100329.1 163 AWTEEEHRLFLLGLEKYGKGDWKGISRNFVVSRTPTQVASHAQKY 207
                      6*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MAAVEADDEE DLLAFEKKNL SPLQQVSILS TEISRKPFRT DPYQRMSTNG TGSSSSWTRE  60
QDKAFENALA IFSEESSDRW EKVAAMVPGK TVEEIKHHYE ILVEDINAIE SDLVPLPHYK  120
DSASRAGDFG VGEEGSQFGQ MQSDSRHGGK SSRSDQERRR GIAWTEEEHR LFLLGLEKYG  180
KGDWKGISRN FVVSRTPTQV ASHAQKYFIR QSSANRERRR TSIHDITSVC GGDTSSTPQG  240
QITGQVDGVA TMAKPTLSDP HLISAVGVPV DHPSLAEMLS DVRAPTPGSL VSGTSKDMPP  300
MTYLQPHSSD QK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.12e-84MYB family protein