PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028100291.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 251aa MW: 28558.5 Da PI: 8.6104 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 83 | 1.9e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ien rqvtfskR++g+lKKA+ELS+LCdaev +iif ++gklye++s XP_028100291.1 9 KKIENVNSRQVTFSKRKAGLLKKAKELSILCDAEVGLIIFNNSGKLYEFAS 59 68***********************************************86 PP | |||||||
2 | K-box | 72.9 | 9e-25 | 85 | 176 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ ++ e+ +el+ L+ e+ +Lq+ R+ +G+dLe +s+keLqqLe+qL++++ ++++K+++lleq+e+++ +e++++ en++Lr+++ee XP_028100291.1 85 KAVSELEKQPHELDALRGEVAKLQKGYRRTMGKDLEGMSFKELQQLEHQLNEGILFVKDRKEQVLLEQLEKSKLQEQKVKLENETLREQIEE 176 5567788999*******************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MGRGKIEIKK IENVNSRQVT FSKRKAGLLK KAKELSILCD AEVGLIIFNN SGKLYEFASP 60 RMEHILARYN NGLESSTLTN PSTEKAVSEL EKQPHELDAL RGEVAKLQKG YRRTMGKDLE 120 GMSFKELQQL EHQLNEGILF VKDRKEQVLL EQLEKSKLQE QKVKLENETL REQIEELGRR 180 STTPTPTHEF HCLGRKRSVL SSNTVCDGYF DTERDSETSL RLGLSSEVFH KRKVCKIESV 240 SNDDSGSQMA S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57390.1 | 1e-53 | MIKC_MADS family protein |