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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028099865.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | AP2 | ||||||||
Protein Properties | Length: 505aa MW: 55352.1 Da PI: 7.4602 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.4 | 6.4e-17 | 149 | 198 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_028099865.1 149 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 198 78*******************......55************************997 PP | |||||||
2 | AP2 | 43.8 | 6.4e-14 | 241 | 291 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g XP_028099865.1 241 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 291 89********.7******5553..2.26**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 505 aa Download sequence |
MWDLNDSPDQ RIRDDVSEGC SSPGDDEKGK RVGSVSNSSS SAVVIEEASD DDDGGDRGGR 60 KRSCSKIFGF SVSESDLPVT RQFFPVEDFE MGTTSGGGGG GSNFPRAHWV GVKFCPLIGG 120 GAGGGGIGKS VELSQPLKKS RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC GKQVYLGGFD 180 TAHAAARAYD RAAIKFRGVE ADINFSLEDY GDDLKQMSNL TKEEFVHVLR RQSTGFPRGS 240 SKYRGVTLHK CGRWEARMGQ FLGKKYVYLG LFDTEIEAAR AYDKAAIKCN GKEAVTNFDP 300 SIYDDELNSA ECSGNAPDHN LDLSLGSRTS ASKQGSQELG GDVQNVAADQ HHAAMAFEVD 360 WHNRGFMPKI NMHQEPYRHG SGGYNETETM QLLNQTHIQL PSSLQKANDM HKYGQFAKGS 420 GPPMQHHMFP PQLSSSNYQI QYPSSSNGGG RTGGDLSLSS GDQQWQLNPP QLFATAAASS 480 GFPQQFSRPQ NWLHKIGFHS LMRPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 1e-121 | AP2 family protein |