PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028099530.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | Dof | ||||||||
Protein Properties | Length: 260aa MW: 28623.7 Da PI: 9.3227 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 126.7 | 7.2e-40 | 32 | 93 | 2 | 63 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 ke+al+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss XP_028099530.1 32 KEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSS 93 7899******************************************************9875 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 260 aa Download sequence |
MDTSAQWPQG VGLVKPMEGS RAITERKPRP QKEQALNCPR CNSTNTKFCY YNNYSLTQPR 60 YFCKTCRRYW TEGGSLRNVP VGGGSRKNKR SSSSSSPSPS SKKLPDHLGP PSFSSQSASQ 120 NPRIHENLNL AYPASTSDNY HNALNPNPSS TSPHVSAMEL LKTGISSRGL SSFMPMPIPD 180 SNSIYPSGFP MQEFKPSLNF SLDGFESGYH HHHHQENSSA RLFFPFEELK QAPNTAEIEQ 240 NSGQGGPSGY WSGMLGGGAW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G61850.2 | 2e-50 | Dof family protein |