PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028099312.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | Trihelix | ||||||||
Protein Properties | Length: 145aa MW: 17056.6 Da PI: 4.4406 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 55.7 | 1.3e-17 | 1 | 48 | 38 | 86 |
trihelix 38 mrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 m++ g++r++k+Ckekwen+nk++k++k+++kkr +e+s+tcpyf+ le XP_028099312.1 1 MKKIGYNRNAKRCKEKWENINKYFKRVKDSNKKR-PEDSKTCPYFEMLE 48 7889*****************************8.99********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence |
MKKIGYNRNA KRCKEKWENI NKYFKRVKDS NKKRPEDSKT CPYFEMLEFI YERKSKKVDN 60 SDNSGCYSKP EDILMLMMGQ QQQQPPPQQQ QQQQQQRPES LTEDGESENT DQNQEDNGGD 120 DDDDDDNGDD YQIVANKPFS VTNIE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33240.1 | 3e-25 | Trihelix family protein |