PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028099021.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 310aa    MW: 35543.4 Da    PI: 8.457
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028099021.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.32.4e-151462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W+++E+ +l+ +++++G+  +W + ++++g++R++k+c++rw++yl
   XP_028099021.1 14 KGPWSPDEEAKLKAYIEEHGTSgNWIALPQKIGLKRCGKSCRLRWLNYL 62
                     79******************99*************************97 PP
2Myb_DNA-binding41.23.8e-1369111246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g +++eEd ++ ++   +G++ W+ Ia+ ++ gRt++++k++w++
   XP_028099021.1  69 GEFSEEEDNIICNLYLSFGSR-WSIIAAQLP-GRTDNDIKNYWNT 111
                      78*******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MGRAPCCDKA NVKKGPWSPD EEAKLKAYIE EHGTSGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGE FSEEEDNIIC NLYLSFGSRW SIIAAQLPGR TDNDIKNYWN TRLKRKLMGR  120
QRKKQQAPRM SSLKQEMRRE SRSFIVSEAM NPILYWPPKL PAPMEAANPS QEDHHLKDQP  180
SVRKLPVRLG GIFLDDHQQP NNNSTNLQHP FDNSIDTFAC STSMNLMNST YSQLPNTQDM  240
FQGFNNYPIE LGKMFYDIPQ QVDGLEGFYG LDMVNCNSRT SSVESASLGY MNINSLSLVY  300
PLMVFNHEDI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112124RLKRKLMGRQRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65790.13e-82MYB family protein