PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028098985.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 261aa MW: 29153.8 Da PI: 7.2485 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.8 | 1.8e-18 | 111 | 165 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q Lee F+ +++++ ++++eLA+kl+L rqV vWFqNrRa+ k XP_028098985.1 111 RKKLRLNKDQSALLEESFKIHSTLNPKQKQELARKLNLRPRQVEVWFQNRRARTK 165 778899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 122.8 | 1.6e-39 | 111 | 200 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rl+k+q++lLEesF+ +++L+p++K+elar+L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+ke ++L+ +l XP_028098985.1 111 RKKLRLNKDQSALLEESFKIHSTLNPKQKQELARKLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQDLK-TL 200 69*************************************************************************************9.44 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MGFDDLCNTG LVLGLGFSSA ADNISTADNL RPNYKPKVTR AFEPSLTLGL CGSDEIENHE 60 LLYRQDSAAS SFSNASVKRE REIGSEEAEI EMTERVSSRV SDEDDDGTNA RKKLRLNKDQ 120 SALLEESFKI HSTLNPKQKQ ELARKLNLRP RQVEVWFQNR RARTKLKQTE VDCEFLKKCC 180 ETLTDENRRL QKELQDLKTL KLTQPFYMQL PAATLTMCPS CERIGGGGGG NGGGDNTPKN 240 PFSMAPKPHF FNPFTNPSAA C |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 160 | 168 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22800.1 | 9e-93 | HD-ZIP family protein |