PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028098931.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 375aa MW: 42487.2 Da PI: 9.6692 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.4 | 2.5e-16 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++l+++++ +G g+W+t + g++R++k+c++rw +yl XP_028098931.1 13 KGAWTKQEDQKLIHYIHTHGEGSWRTLPMAAGLHRCGKSCRLRWINYL 60 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.3 | 5.6e-16 | 66 | 110 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++ XP_028098931.1 66 RGNFAQDEEDLIIKLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSH 110 89999*****************.*********.***********987 PP | |||||||
3 | Myb_DNA-binding | 27 | 1e-08 | 227 | 250 | 23 | 47 |
-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqky 47 +W++Ia +++ gRt++++k++w+++ XP_028098931.1 227 RWSLIAGRLP-GRTDNEVKNYWNSH 250 6*********.***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 375 aa Download sequence |
MRKPCCDKKE THKGAWTKQE DQKLIHYIHT HGEGSWRTLP MAAGLHRCGK SCRLRWINYL 60 RPDIKRGNFA QDEEDLIIKL HALLGNRWSL IAGRLPGRTD NEVKNYWNSH IKRKLIRIGI 120 DPNNHRLNQT LPRPQNQSMS NLTTSSESTN DASKPLKAFT GNDGVSVNAT CLEDDNSSSN 180 ELNLNLDLTI AIPCAFSLFE GKKGQEKELK VAKESESDQL PTLLLFRWSL IAGRLPGRTD 240 NEVKNYWNSH IKRKLIRIGI DPNNHRLNQT LPRPQNQYMS NLTTSSESTN DASKPLKAFT 300 DNDRVSLNAT CPEDDNSSSN ELNLNLDLTI AVPCAFSLFE GKKGQEKELK VAKKSESDHL 360 PTLLLFRSRI KLVSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09460.1 | 2e-71 | MYB family protein |