PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028098738.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 346aa MW: 38576.3 Da PI: 6.7339 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 62.5 | 8.6e-20 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lvd+++++G g+W++ ++ g++R++k+c++rw +yl XP_028098738.1 13 KGPWTPEEDQKLVDYIHKHGHGSWRALPNLAGLNRCGKSCRLRWTNYL 60 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 55.1 | 1.7e-17 | 66 | 111 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ +++++ lG++ W++Ia +++ gRt++++k++w+++l XP_028098738.1 66 RGKFSQEEEQTILHLHSILGNK-WSAIATHLP-GRTDNEIKNFWNTHL 111 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 346 aa Download sequence |
MGRSPSDENG LKKGPWTPEE DQKLVDYIHK HGHGSWRALP NLAGLNRCGK SCRLRWTNYL 60 RPDIKRGKFS QEEEQTILHL HSILGNKWSA IATHLPGRTD NEIKNFWNTH LKKKLIQMGF 120 DPMTHRPRTD LFATLPHLIA LANLRELIDQ PPLEQEAVKL QAEAIQLAKI QYLQHLIQSS 180 ASSHIQNNIT DIENLSLLNS MPPIKENPFL NSTQVLQNQA LFGIENATSQ PLHYPIMNSS 240 SDPQVPFNFQ TPLNSEMGQG INNATIMISQ GDDHNHNHNN PPHSPWILPS PSSSSGHRLP 300 MLSESLVSNP GDASSSSSHG GGGGGDGSSS YWPELLFDES FMHEIC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34670.1 | 1e-113 | MYB family protein |