PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028098262.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 228aa MW: 26058.5 Da PI: 9.1472 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.2 | 9.1e-14 | 12 | 59 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W +eEd +l+++v+ +G g+W+ ++++ g+ R +k+c+ rw +yl XP_028098262.1 12 KGLWKPEEDIILKNYVEAHGEGNWANVSEKSGLMRGGKSCRMRWKNYL 59 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.9 | 3.5e-16 | 65 | 108 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rgr++ +E +l+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_028098262.1 65 RGRMSDDEKDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNT 108 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MEMKEGKSSI KKGLWKPEED IILKNYVEAH GEGNWANVSE KSGLMRGGKS CRMRWKNYLR 60 PNIKRGRMSD DEKDLIIRLH KLLGNRWSLI AGRLPGRTDN EVKNYWNTRL NKRSSQTKTT 120 TICSKNKKKL QQFPTSQPTR CKISENDDER SQGRKGEDIT AVSPWIEHAR SFNFDTEPPL 180 FPANDALLFT DDEPFMPILD SLALYEALQS NGGEEYPQEV AGHATGLC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52600.1 | 9e-68 | MYB family protein |