PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028098134.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 294aa    MW: 30505.1 Da    PI: 4.6203
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028098134.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.60.0002147169123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     y+C  Cg+ F++   L  H+rtH
  XP_028098134.1 147 YVCYLCGRGFRTDRGLCGHLRTH 169
                     9*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MSNSGDQNAS PQGSQNPAPR RPSQVRRPRI SGEGPSDSSS PPQVPRQGGA QFLRPRLFGV  60
TSSRPTFGGL DSGSGGGFDV GGGSGSGSGG GVVVGAAGLQ IGGAGGIAQR KRFSDPGAGP  120
SRPVGDNPPP PPPPPPPPHA VAGGAPYVCY LCGRGFRTDR GLCGHLRTHG NRQWRGAYPP  180
PTFSRDEFYE AGVGYLLNPP LQPHDGADLE EEEDVEEEGG NHAAAAVVED EEERREVVDP  240
TGDQPAAGEN EAAPLQREPL DLNKKSEEAM AAEADSPGLN LNESPRRDDQ GNYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35610.13e-09C2H2 family protein