PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028097759.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | Nin-like | ||||||||
Protein Properties | Length: 200aa MW: 22159.7 Da PI: 7.8755 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 63.1 | 4.6e-20 | 86 | 134 | 3 | 51 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 + +s+edl+++F + dAAk Lgv++++LKr CRq+GI+ WP+Rk ++ XP_028097759.1 86 SVLSFEDLQQHFGCKRDDAAKALGVSVSTLKRSCRQHGIPWWPSRKKTK 134 669*******************************************776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MHEKHDSRLR CVQTPLHARS SPRTIALLGG GEMVQLDSSK QQSLVEFDVT NNSAHLVRAS 60 QSSSTVSHSD ETNSRETLKR KCTTESVLSF EDLQQHFGCK RDDAAKALGV SVSTLKRSCR 120 QHGIPWWPSR KKTKVSKTDC ILLEPQGEKD VSPTCSKMPT EGQTERDNEM VGHLQDQNEG 180 PNLLNTGNGS NKDSITTLIF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59580.1 | 2e-14 | Nin-like family protein |