PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028097603.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 710aa MW: 80411.2 Da PI: 5.4504

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028097603.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	48	2.4e-15	518	559	4	45
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWP 45 +i led+ ++ +l++++AAk+L+v+ ++LKr CR yG+kRWP XP_028097603.1 518 KIPLEDILQNSALSLENAAKNLKVSKSTLKRVCRPYGVKRWP 559 7889*************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 710 aa Download sequence
MAEEFFSYLS DDFKEYMFKE LNWLLSKYFY GVVFWSREDD EPQRPSTLPD GDISYLNKII 60 RDLLYTIMYG VYGPPYPVLI QFWAPITTKE GRSFLTTRNQ PFSLTYNPPD MEGFLGYRMI 120 CMDSKFDIDL DGGKTCEQHL PARVFKHQFP ESTPNVEFYS ITEYPQRHDA LRCRVRHSLA 180 FPVFESSTQR CVGVIEVVTP EKDLSCSLYF EYSIYKDFED DDKNEAHKVA FDEIKNMLKR 240 VCDVHDVPFA QAWVPCKMGC PCRALVDGGI LHASCCYKKV DYGEDEDGYD YDEDDYGEYD 300 DFRHVSSLSH SKNGVGVVGR ALLSTNMVFC RDVTQLSLTE YPLAHYAREA GLSGCFAICL 360 ESNCTGNDVY VLEFFMPMSN NASENPHTSL RKILETMKKN LSCFRVASRE ELGEELHIEE 420 ISIQNGEKLD PVQIPQTTIS LPRLELSQSK VAVMQVDSSD QQLVNAINTG SNAGGTEHSN 480 FAIACTQEKS TVKVSKMKGN KSGGTVKASK REGNNKIKIP LEDILQNSAL SLENAAKNLK 540 VSKSTLKRVC RPYGVKRWPP HINKVGCSQL DESAPCVNSD HLPSTQSLAT IVHTEPYDTT 600 MQDANIVTIK AKYGEGVTIK FPLSLSSSFL QLQQEVAKRL DLKAGTYYVK YEDEDGELIL 660 IGCDEDLQDY MHDSRSLGRS SIVVLLEQKL PITDHKKEKI KKLLITHRTT

Sequence ? help Back to Top

Protein Sequence Length: 710 aa Download sequence

MAEEFFSYLS DDFKEYMFKE LNWLLSKYFY GVVFWSREDD EPQRPSTLPD GDISYLNKII  60
RDLLYTIMYG VYGPPYPVLI QFWAPITTKE GRSFLTTRNQ PFSLTYNPPD MEGFLGYRMI  120
CMDSKFDIDL DGGKTCEQHL PARVFKHQFP ESTPNVEFYS ITEYPQRHDA LRCRVRHSLA  180
FPVFESSTQR CVGVIEVVTP EKDLSCSLYF EYSIYKDFED DDKNEAHKVA FDEIKNMLKR  240
VCDVHDVPFA QAWVPCKMGC PCRALVDGGI LHASCCYKKV DYGEDEDGYD YDEDDYGEYD  300
DFRHVSSLSH SKNGVGVVGR ALLSTNMVFC RDVTQLSLTE YPLAHYAREA GLSGCFAICL  360
ESNCTGNDVY VLEFFMPMSN NASENPHTSL RKILETMKKN LSCFRVASRE ELGEELHIEE  420
ISIQNGEKLD PVQIPQTTIS LPRLELSQSK VAVMQVDSSD QQLVNAINTG SNAGGTEHSN  480
FAIACTQEKS TVKVSKMKGN KSGGTVKASK REGNNKIKIP LEDILQNSAL SLENAAKNLK  540
VSKSTLKRVC RPYGVKRWPP HINKVGCSQL DESAPCVNSD HLPSTQSLAT IVHTEPYDTT  600
MQDANIVTIK AKYGEGVTIK FPLSLSSSFL QLQQEVAKRL DLKAGTYYVK YEDEDGELIL  660
IGCDEDLQDY MHDSRSLGRS SIVVLLEQKL PITDHKKEKI KKLLITHRTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	2e-71	Nin-like family protein