PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028097526.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 495aa MW: 56845.5 Da PI: 8.0047 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 54.8 | 1.6e-17 | 19 | 72 | 1 | 54 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 r++R +++++q++ Le++Fe++++p++++r +L k++gLt q+k+WFqN+R+ XP_028097526.1 19 RKRRYRHSPYQTQMLETFFEQCQHPNERQRCQLGKEVGLTPLQIKFWFQNKRTL 72 899*************************************************85 PP | |||||||
2 | START | 50.3 | 7.2e-17 | 231 | 362 | 19 | 131 |
TT-EEEE.......EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGG...CT-TT-SEEEEEEEECTT......EEEE CS START 19 pgWvkss.......esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddke...qWdetlakaetlevissg......galq 92 +W k++ + en+++ ++ + + e +r++++v m+ a+lve lld+++ + + ++ka++l+ + + g lq XP_028097526.1 231 RLWIKDPidgrhiiQRENYEKIFSRTS---HlkssrTRFESSREEAIVRMNGAQLVEMLLDSSKrvdLFPTIITKATILQELGNRiprnlsGSLQ 322 578888888884445555555444443...345577899************************99*******************9********** PP EEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE CS START 93 lmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvd 131 l + + lsplv Rdf+f+Ry+ ++g+ w+iv+vS d XP_028097526.1 323 LVYEQVHILSPLVGpRDFYFLRYCAEMGKNEWMIVEVSYD 362 *************99***********************77 PP | |||||||
3 | START | 48.6 | 2.3e-16 | 375 | 458 | 119 | 206 |
TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 119 gagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206 ++ + + S ++ ++pp s++ R lpSg+li+++ ng s++twvehv+++++++ h l+ ++ +gla ga +w+ tlqr c++ XP_028097526.1 375 DQHHHQPHSSSATPSAPPP--SHSWR---LPSGCLIRDLNNGCSTITWVEHVEVDDKVVtHRLYTDFICRGLAYGADRWLLTLQRMCQR 458 5555555667778888887..47777...**********************************************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 495 aa Download sequence |
MVEFMSSEEF ESSSSSRGRK RRYRHSPYQT QMLETFFEQC QHPNERQRCQ LGKEVGLTPL 60 QIKFWFQNKR TLVKTQNEKT EGHALRAENE RLKIENIAAR EMLKDEYCKA CKGISCTKED 120 HLHQLRLENC QLNDKYEYLC NLLATMGISV SKNPSLQRLP SIGSSSDGSE NFLGKRMRGL 180 SLGSSSNGSE NSVDHTLKSQ LKQVQDSDTL RMVQTVSNAI DELTSLFIMD RLWIKDPIDG 240 RHIIQRENYE KIFSRTSHLK SSRTRFESSR EEAIVRMNGA QLVEMLLDSS KRVDLFPTII 300 TKATILQELG NRIPRNLSGS LQLVYEQVHI LSPLVGPRDF YFLRYCAEMG KNEWMIVEVS 360 YDIFDKIESS TQQQDQHHHQ PHSSSATPSA PPPSHSWRLP SGCLIRDLNN GCSTITWVEH 420 VEVDDKVVTH RLYTDFICRG LAYGADRWLL TLQRMCQRFA FQFLPTPLPD PGNIKLNADG 480 CAKESLEKAS FGRNL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73360.1 | 2e-87 | HD-ZIP family protein |