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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028097117.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | AP2 | ||||||||
Protein Properties | Length: 476aa MW: 52653.1 Da PI: 5.4317 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.3 | 3.4e-17 | 147 | 196 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_028097117.1 147 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 196 78*******************......55************************998 PP | |||||||
2 | AP2 | 41.2 | 4.1e-13 | 239 | 289 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k +g XP_028097117.1 239 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEVEAARAYDKAAIKCNG 289 89********.7******5553..2.26**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 476 aa Download sequence |
MMLDLNLTAV ATDSISDGLE AVTEKFLELS GVHMDDSGTS NSSIINLDTS STNLGDEEFS 60 SSHLYSFDIL KTTECEEYNN GVPQTKQLFP VNGEGGEDAS SCQQRQWLDL SVVAGNSGGP 120 KEERGLVVPQ QRQQVRKSRR GPRSRSSQYR GVTFYRRTGR WESHIWDCGK QVYLGGFDTA 180 HAAARAYDRA AIKFRGTDAD INFNISDYNE DFQQMKNLTK EEFVHVLRRQ STGFSRGTSK 240 YRGVTLHKCG RWEARMGQFL GKKYIYLGLF DSEVEAARAY DKAAIKCNGR EAVTNFEAST 300 YEEELSSEIE NGGSSHNLDL NLGISTPYFA NGQMGSNDLS SGLHLQSDLS NMHAENSVTT 360 MGIQPPHGQI MVSEHPPLWK GVNSHAVPIY EGRAIENSME FDSSPSWALQ FQGPFGGDVP 420 LPLFSTAASS GFATSTIATS SAAVYQPWFP TTTIPHNHYF PSVIDSNNIS QYYCRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 1e-106 | AP2 family protein |