PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028096711.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YA
Protein Properties Length: 336aa    MW: 37086.4 Da    PI: 8.9749
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028096711.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.22.3e-32184240158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     dep+YVNaKQ+++Il+RRq Rakle+++k+ +k+rkpylheSRh hAl+R+RgsgGrF
  XP_028096711.1 184 DEPIYVNAKQFHAILRRRQYRAKLEAQNKV-SKARKPYLHESRHLHALKRARGSGGRF 240
                     79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MQGFRKKDSD LSSAQSTVPR VGHCASWWTS TASQIQESSL SKNLGLKMST PNQHGHNVKQ  60
MGFQFQDQDS SSTQSTGQSY NEVASVGESN PCGKSIMSMQ SGYNGTHGKP DVGQIKSALL  120
NGTQDCVLPP SQVDYRQPFT CIPLPYAEPY YGGLLATYGP QAMIHHPQML GVARVPLPLD  180
FPQDEPIYVN AKQFHAILRR RQYRAKLEAQ NKVSKARKPY LHESRHLHAL KRARGSGGRF  240
LNTQKLQECK LNGMTNGKDN SGSVQFHLTA NMSESEVHHP ENYKEGPSTT SCSDVTSASN  300
SDGMFQHQEF RFSLYPNCIG GAVQSGENLH SLSVHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.13e-68NF-YA family protein