PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028096690.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

AP2

Protein Properties

Length: 359aa MW: 40472.8 Da PI: 7.917

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028096690.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.2	6.4e-16	46	105	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n k+ ++++lg ++ +e Aa a++ a++k++g XP_028096690.1 46 SVYRGVTRHRWTGRYEAHLWDkNCWNEsqnKKgRQVYLGAYDDEEAAAHAYDLAALKYWG 105 78*****************999955656446***********************98 PP
2	AP2	51.1	3.4e-16	148	199	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g XP_028096690.1 148 SKYRGVARHHHNGRWEARIGRmF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 199 89**99******99988...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MAKISQQNRK NSSNITSTSN NKKDPATKVK RTRKSVPRDS PPQRSSVYRG VTRHRWTGRY 60 EAHLWDKNCW NESQNKKGRQ VYLGAYDDEE AAAHAYDLAA LKYWGQDTIL NFPLPTYEEE 120 LKEMEGQSRE EYIGSLRRKS SGFSRGVSKY RGVARHHHNG RWEARIGRMF GNKYLYLGTY 180 ATQEEAATAY DMAAIEYRGL NAVTNFDLSR YIKWLRPNQN TTTDPNNSKP NPNPNVDINP 240 ITNPSNVVGL TFLHHHQQSP SSATEATLLP PCPSSGATAS SALGLLLQSS KFKEMLERTS 300 VADCLSTPPE SDPPRSSFPD DIQTYFDCQN SGSFVEEDDI IFGDLNSFSS SMFQCEIDA

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MAKISQQNRK NSSNITSTSN NKKDPATKVK RTRKSVPRDS PPQRSSVYRG VTRHRWTGRY  60
EAHLWDKNCW NESQNKKGRQ VYLGAYDDEE AAAHAYDLAA LKYWGQDTIL NFPLPTYEEE  120
LKEMEGQSRE EYIGSLRRKS SGFSRGVSKY RGVARHHHNG RWEARIGRMF GNKYLYLGTY  180
ATQEEAATAY DMAAIEYRGL NAVTNFDLSR YIKWLRPNQN TTTDPNNSKP NPNPNVDINP  240
ITNPSNVVGL TFLHHHQQSP SSATEATLLP PCPSSGATAS SALGLLLQSS KFKEMLERTS  300
VADCLSTPPE SDPPRSSFPD DIQTYFDCQN SGSFVEEDDI IFGDLNSFSS SMFQCEIDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	1e-109	AP2 family protein