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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028096690.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | AP2 | ||||||||
Protein Properties | Length: 359aa MW: 40472.8 Da PI: 7.917 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.2 | 6.4e-16 | 46 | 105 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n k+ ++++lg ++ +e Aa a++ a++k++g XP_028096690.1 46 SVYRGVTRHRWTGRYEAHLWDkNCWNEsqnKKgRQVYLGAYDDEEAAAHAYDLAALKYWG 105 78*******************999955656446*************************98 PP | |||||||
2 | AP2 | 51.1 | 3.4e-16 | 148 | 199 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g XP_028096690.1 148 SKYRGVARHHHNGRWEARIGRmF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 199 89****99**********99988...3.6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 359 aa Download sequence |
MAKISQQNRK NSSNITSTSN NKKDPATKVK RTRKSVPRDS PPQRSSVYRG VTRHRWTGRY 60 EAHLWDKNCW NESQNKKGRQ VYLGAYDDEE AAAHAYDLAA LKYWGQDTIL NFPLPTYEEE 120 LKEMEGQSRE EYIGSLRRKS SGFSRGVSKY RGVARHHHNG RWEARIGRMF GNKYLYLGTY 180 ATQEEAATAY DMAAIEYRGL NAVTNFDLSR YIKWLRPNQN TTTDPNNSKP NPNPNVDINP 240 ITNPSNVVGL TFLHHHQQSP SSATEATLLP PCPSSGATAS SALGLLLQSS KFKEMLERTS 300 VADCLSTPPE SDPPRSSFPD DIQTYFDCQN SGSFVEEDDI IFGDLNSFSS SMFQCEIDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G16060.1 | 1e-109 | AP2 family protein |