PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028096490.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 270aa MW: 30655.3 Da PI: 6.3177 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 56.9 | 3.6e-18 | 89 | 140 | 6 | 56 |
S--HHHHHHHHHHHHH.SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFek.nrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++ eq+++Le+ F++ ++++ e++ +LA+ l+L+ rqV +WFqNrRa++k XP_028096490.1 89 RLGMEQVKALEKSFHElGNKLDPERKLQLARALNLQPRQVAIWFQNRRARWK 140 56789***********9**********************************9 PP | |||||||
2 | HD-ZIP_I/II | 123.4 | 1.1e-39 | 85 | 176 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeee.kLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekk+rl eqvk+LE+sF+e kL+perK +lar+L+lqprqva+WFqnrRAR+ktkqlEkdy+ Lkr++++lk++n +L++++++L++el XP_028096490.1 85 EKKKRLGMEQVKALEKSFHELGnKLDPERKLQLARALNLQPRQVAIWFQNRRARWKTKQLEKDYDLLKREFESLKADNGALKSHNNKLHAEL 176 69****************88544******************************************************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MICDCDGNGM AFASPHEFMF QTHELNHPPS ILPSCPPQDF HGAQTRRSMS FSGIGGKWDH 60 QEMQVEDDMS DDDDGGSNSQ VVLGEKKKRL GMEQVKALEK SFHELGNKLD PERKLQLARA 120 LNLQPRQVAI WFQNRRARWK TKQLEKDYDL LKREFESLKA DNGALKSHNN KLHAELLALK 180 GIESNGIGPI NLNKEIEGSI ESSLDTYKHI FHSSTGATSS VTHLLQSSSR SDLQCRKIDQ 240 TVPDESFCNM FSSIEDQPSF WPWPEQQHIH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 135 | 143 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15150.1 | 8e-61 | HD-ZIP family protein |