PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028095820.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 609aa MW: 67645.6 Da PI: 8.1418

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028095820.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.5	2.7e-17	48	93	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 grWT+eEd++l+ v+++ g+tWk Ia+ ++ +Rt+ qc +rwqk+l XP_028095820.1 48 GRWTEEEDKILALSVQKFKGRTWKMIAESIP-NRTDVQCLHRWQKVL 93 8****************************.**********986 PP
2	Myb_DNA-binding	53.1	7.2e-17	99	145	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ++++ v + G+ W+ Ia++++ gR +kqc++rw+++l XP_028095820.1 99 KGPWTKEEDGIIIEQVGKQGNTKWSEIAKYLP-GRIGKQCRERWYNHL 145 79****************************.***********97 PP
3	Myb_DNA-binding	48.9	1.5e-15	151	193	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +g+WT+ E++ l+ a+k +G++ W+ Ia+ + gRt++ +k++w+ XP_028095820.1 151 KGPWTEKEELELISAHKIYGNR-WAEIAKILH-GRTENAIKNHWN 193 79******************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 609 aa Download sequence
MEEVKGSDAE AEKDGGALKF DVNSDSADLK PVSLQGRITG PTRRSSMGRW TEEEDKILAL 60 SVQKFKGRTW KMIAESIPNR TDVQCLHRWQ KVLHPDLVKG PWTKEEDGII IEQVGKQGNT 120 KWSEIAKYLP GRIGKQCRER WYNHLNPGIN KGPWTEKEEL ELISAHKIYG NRWAEIAKIL 180 HGRTENAIKN HWNCSMKKKL NLYSTSGTVS SHPGFNDCDK GCAKFEPIKQ QLGPPFSYEQ 240 RIDYERTVDT SLKLVLGNGK GRGNHPQSFK QGDCRIPQEG SYSVTPPFRA HGWIGEQCQD 300 GNNNVKNSGN PHQIIANQPN AHVNPLSSYK HTCSSWSSFK HTQNPLSSNP HLDVTGYIGH 360 NYTPCEAALP VTSKKFLMFP ERTHGNMLSV NCLGSGDSGL SSQTHNSPSF RPNYESNKKS 420 SDPETPSKLI DKSLGGLCYE PLQEEDLNIF VKTGEFLSTD SYIRLPLTPT SFCTPKTNEK 480 HKSTDYSSPE SILRSAAMSF KNMPSILRKR GLRNSNQASI TSCSDCTTEE NADTTINGSV 540 LPNAKQPFFS PPKAQKLENS AAIRSVEKRL EYAFDNVSDS ANCTVNVSVE ADASGKNQDS 600 DVSVTCLGD

Sequence ? help Back to Top

Protein Sequence Length: 609 aa Download sequence

MEEVKGSDAE AEKDGGALKF DVNSDSADLK PVSLQGRITG PTRRSSMGRW TEEEDKILAL  60
SVQKFKGRTW KMIAESIPNR TDVQCLHRWQ KVLHPDLVKG PWTKEEDGII IEQVGKQGNT  120
KWSEIAKYLP GRIGKQCRER WYNHLNPGIN KGPWTEKEEL ELISAHKIYG NRWAEIAKIL  180
HGRTENAIKN HWNCSMKKKL NLYSTSGTVS SHPGFNDCDK GCAKFEPIKQ QLGPPFSYEQ  240
RIDYERTVDT SLKLVLGNGK GRGNHPQSFK QGDCRIPQEG SYSVTPPFRA HGWIGEQCQD  300
GNNNVKNSGN PHQIIANQPN AHVNPLSSYK HTCSSWSSFK HTQNPLSSNP HLDVTGYIGH  360
NYTPCEAALP VTSKKFLMFP ERTHGNMLSV NCLGSGDSGL SSQTHNSPSF RPNYESNKKS  420
SDPETPSKLI DKSLGGLCYE PLQEEDLNIF VKTGEFLSTD SYIRLPLTPT SFCTPKTNEK  480
HKSTDYSSPE SILRSAAMSF KNMPSILRKR GLRNSNQASI TSCSDCTTEE NADTTINGSV  540
LPNAKQPFFS PPKAQKLENS AAIRSVEKRL EYAFDNVSDS ANCTVNVSVE ADASGKNQDS  600
DVSVTCLGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	1e-78	MYB family protein