PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028094900.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 1363aa MW: 153489 Da PI: 5.7305

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028094900.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	32.2	2.1e-10	535	578	5	48
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 is ed++++ +++ dAA +L ++++LKr+C +yGI W Rk XP_028094900.1 535 ISSEDIQQHVGMKLDDAAASLHDSQSTLKRACSEYGITGWSCRK 578 899***************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 1363 aa Download sequence
MADDQQHVLW RENRGDDDDD KMSDFPHNLI SYVNNNQFLC DRGIFNRGSV FSTLQHHPPS 60 QPSPFSKIID LDSETPIAAN QELIGKIKSI MKWIVFCPGQ FLVQFWKVIE IGGRRLLTTQ 120 DQPFGLSTTH EGLCSYRLIS LNYQFYVDGE SEADLGLPGR VFRHRRPESS PNVQYYSCKE 180 YPQRDHDVIS KVRRSWALPV LESSGQCCVG VLELVAAAEL KFXPKYPFIN LIDGIYKRVE 240 EVGLRSSETC NHLYNKHKKY EDEALKDALA EIKKVLIEVC KSHDLPLAQT WVPCRLCNPA 300 VAGGSFNVSC REHLMFRFDI ACCRDKDKLP FVDVCTLHSL GKGQGVVGKA FSSHNLVFCK 360 DITQFSIIEY PLVYYACKYG LTGCFSICLR SSYTGDNVYV LEFFLRPSNT EGGDPKIALV 420 PLLTTLKQHF RSFKVASGEE LGEELSVEVI DSSKDDKLDS FQIPQIARSP DMMKNGGEMD 480 YLDLSDQQLM EEDVIDTRNN VVLNTQINNI IVTSSQQKCI TNSSQRQQRK AGIPISSEDI 540 QQHVGMKLDD AAASLHDSQS TLKRACSEYG ITGWSCRKRN KDNLAPSNKF VQGVAQEQIQ 600 ESSQPPISDP PCKQDLATTY TKAHSMATQD TSIVTIKAKH GENFIKFKFP VLSGMVEFQQ 660 EVAKRLHLED GTYSVKYQDD GNNWILIACD EELRDYISKS KSLGKNIVTM SLEPNYNKFV 720 QGVAQEQIRE SCQPPISDPP RKQGLATTCA KVHSMATQDI VTIKAKHGEN FIKFKLSVLS 780 GMVEFQQEVA KRLQLEDGTY SVKYQDDGNN WILIACDEEL RDYISKSKSL GKNIVTMSLE 840 PNYDELVQGV SQEQIQESSQ PPIFDPPRKQ DLATTCAKVH SLATQDTSTV TIKAKHGENF 900 IKFKLPVLSG MVEFQQEVAK RLQLEDGTYS VKYQDDGNNW ILIACDEELR DYISKSKSLG 960 KNIVTMSLEP NCDKLVQDAA QEQIRESSQP PISDPPRKQD LATTCAMVHS LATQDTSTVT 1020 IKAKHGENFI KFKLPVLSGM VEFQQEVAKR LQLEDGTYSV KYQDDGNNWI LIACDEELQD 1080 YISKSKSLGK NIVTMSLEPN YDKLVQDAAQ EQIRESSQPP ISDPPRKQDL ATTCTKVHSL 1140 ATQDTSTVTI KAKHGENFIK FKLPVLSGMV EFQQEVAKRL QLEDGTYSVK YQDDGDNWIL 1200 IACDEELRDY ISKSKSLGKN IVTMSLEPNC DILVQDAAQE QIRESSQPPI SDPPRKEDLA 1260 TTCAKVHSMA TQDTSIVTIK AKHGENFIKF KLPVLSGMVE FQQEVARRLH LDDGTYSVKY 1320 QDDGNNWILI ARDEELRDYI SKSKSLGKNI VTMLLQPITS CPP

Sequence ? help Back to Top

Protein Sequence Length: 1363 aa Download sequence

MADDQQHVLW RENRGDDDDD KMSDFPHNLI SYVNNNQFLC DRGIFNRGSV FSTLQHHPPS  60
QPSPFSKIID LDSETPIAAN QELIGKIKSI MKWIVFCPGQ FLVQFWKVIE IGGRRLLTTQ  120
DQPFGLSTTH EGLCSYRLIS LNYQFYVDGE SEADLGLPGR VFRHRRPESS PNVQYYSCKE  180
YPQRDHDVIS KVRRSWALPV LESSGQCCVG VLELVAAAEL KFXPKYPFIN LIDGIYKRVE  240
EVGLRSSETC NHLYNKHKKY EDEALKDALA EIKKVLIEVC KSHDLPLAQT WVPCRLCNPA  300
VAGGSFNVSC REHLMFRFDI ACCRDKDKLP FVDVCTLHSL GKGQGVVGKA FSSHNLVFCK  360
DITQFSIIEY PLVYYACKYG LTGCFSICLR SSYTGDNVYV LEFFLRPSNT EGGDPKIALV  420
PLLTTLKQHF RSFKVASGEE LGEELSVEVI DSSKDDKLDS FQIPQIARSP DMMKNGGEMD  480
YLDLSDQQLM EEDVIDTRNN VVLNTQINNI IVTSSQQKCI TNSSQRQQRK AGIPISSEDI  540
QQHVGMKLDD AAASLHDSQS TLKRACSEYG ITGWSCRKRN KDNLAPSNKF VQGVAQEQIQ  600
ESSQPPISDP PCKQDLATTY TKAHSMATQD TSIVTIKAKH GENFIKFKFP VLSGMVEFQQ  660
EVAKRLHLED GTYSVKYQDD GNNWILIACD EELRDYISKS KSLGKNIVTM SLEPNYNKFV  720
QGVAQEQIRE SCQPPISDPP RKQGLATTCA KVHSMATQDI VTIKAKHGEN FIKFKLSVLS  780
GMVEFQQEVA KRLQLEDGTY SVKYQDDGNN WILIACDEEL RDYISKSKSL GKNIVTMSLE  840
PNYDELVQGV SQEQIQESSQ PPIFDPPRKQ DLATTCAKVH SLATQDTSTV TIKAKHGENF  900
IKFKLPVLSG MVEFQQEVAK RLQLEDGTYS VKYQDDGNNW ILIACDEELR DYISKSKSLG  960
KNIVTMSLEP NCDKLVQDAA QEQIRESSQP PISDPPRKQD LATTCAMVHS LATQDTSTVT  1020
IKAKHGENFI KFKLPVLSGM VEFQQEVAKR LQLEDGTYSV KYQDDGNNWI LIACDEELQD  1080
YISKSKSLGK NIVTMSLEPN YDKLVQDAAQ EQIRESSQPP ISDPPRKQDL ATTCTKVHSL  1140
ATQDTSTVTI KAKHGENFIK FKLPVLSGMV EFQQEVAKRL QLEDGTYSVK YQDDGDNWIL  1200
IACDEELRDY ISKSKSLGKN IVTMSLEPNC DILVQDAAQE QIRESSQPPI SDPPRKEDLA  1260
TTCAKVHSMA TQDTSIVTIK AKHGENFIKF KLPVLSGMVE FQQEVARRLH LDDGTYSVKY  1320
QDDGNNWILI ARDEELRDYI SKSKSLGKNI VTMLLQPITS CPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	1e-95	Nin-like family protein