PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028094054.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family Trihelix
Protein Properties Length: 545aa    MW: 63432.7 Da    PI: 5.388
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028094054.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix87.21.9e-27123207186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     rW++qe+l+L+e+r+++++++++ +lk+plW++vs+ m +e+g++rs  +C+ek+enl k+ykk+keg+ +r+  + +++++f+ql+
  XP_028094054.1 123 RWPRQETLTLLEIRSRLDSKFKEINLKAPLWDDVSRIMwEEHGYQRSGRKCREKFENLYKYYKKTKEGKAGRH--DGKHYRFFRQLQ 207
                     8*************************************999*****************************985..5557******98 PP
2trihelix49.31.2e-15413488175
        trihelix   1 rWtkqevlaLiearremeerlrrg.klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtses 75 
                     +W + e+   i++r++me r++++ ++k+ lWee+ ++m+  g+  s  +C++ wen++ ++ k+ e ekk+ s +
  XP_028094054.1 413 EWLEPEISSFIQLRTSMEPRFQESeNSKEWLWEEIVARMACLGYDWSVMRCRQTWENISFYFNKTMEYEKKGGSVQ 488
                     5*********************96279999****************************************983322 PP
Sequence ? help Back to Top
Protein Sequence    Length: 545 aa     Download sequence    
MEERNRNNYG FLDLRQIMGG TGRNCFPQPP QPQPQPQLSE PFILGGCCHS TGEVFGHEFG  60
QHNNINNNTG STSTSSVVVV TPNPSPSPPP PSFSAAAHAH QFGLEMETVN GDGGGGSSSS  120
SSRWPRQETL TLLEIRSRLD SKFKEINLKA PLWDDVSRIM WEEHGYQRSG RKCREKFENL  180
YKYYKKTKEG KAGRHDGKHY RFFRQLQALC EEPINESSDT HLAKYNLVYP NPMTNSFIFN  240
QENQEDLQDQ KLLESDNRSN SSEFETSSSI NNGDDLSAMA LMLKRSMEKR TNTNESQSFR  300
KVKKSWKAKV VEFVDSGMRK LMDTQEVWME KMLKTIEQKE EESMIREEEW RKENKARLDQ  360
EYKFWANERA WIEARDTALM DVLQKFTRKE LKVSLPEIQD CKDMEDDTNR STEWLEPEIS  420
SFIQLRTSME PRFQESENSK EWLWEEIVAR MACLGYDWSV MRCRQTWENI SFYFNKTMEY  480
EKKGGSVQNS RIYYDGQEIG TQNNDGLSTC SSKIGNEVHE NNFPVLMMNE KGTLWDNYDL  540
KFSKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03680.15e-84Trihelix family protein