PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028093635.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

AP2

Protein Properties

Length: 109aa MW: 12560 Da PI: 12.0641

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028093635.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	25.4	3.6e-08	71	109	1	34
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslg 34 s y+GV++++++gr++A+++d s+n k+ ++++lg XP_028093635.1 71 SIYRGVTRHRWTGRFEAHLWDkSSWNSiqnKKgRQIYLG 109 57*******************777788865446999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 109 aa Download sequence
MKRSPSSCWS SSSTSSVESD LHPAHHHDDQ SAQRKPKAKR PRSRPRGAIN KNLNQSTSQK 60 IINPNSPRRS SIYRGVTRHR WTGRFEAHLW DKSSWNSIQN KKGRQIYLG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	33	40	QRKPKAKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.1	3e-25	AP2 family protein