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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028093635.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | AP2 | ||||||||
Protein Properties | Length: 109aa MW: 12560 Da PI: 12.0641 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 25.4 | 3.6e-08 | 71 | 109 | 1 | 34 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslg 34 s y+GV++++++gr++A+++d s+n k+ ++++lg XP_028093635.1 71 SIYRGVTRHRWTGRFEAHLWDkSSWNSiqnKKgRQIYLG 109 57*******************777788865446999987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 109 aa Download sequence |
MKRSPSSCWS SSSTSSVESD LHPAHHHDDQ SAQRKPKAKR PRSRPRGAIN KNLNQSTSQK 60 IINPNSPRRS SIYRGVTRHR WTGRFEAHLW DKSSWNSIQN KKGRQIYLG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 33 | 40 | QRKPKAKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.1 | 3e-25 | AP2 family protein |