PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028092769.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Dof

Protein Properties

Length: 358aa MW: 38880.4 Da PI: 10.4612

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028092769.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.7	3e-39	83	141	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk++ XP_028092769.1 83 NQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKTV 141 7899****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MFPPLSLSHR SSHNQKRKKK RKRKKKMIQE LLGGGAGLIG ERKISITGVL EGSSPSPSPS 60 SSSPSPSSSA ATTPASSSAP AENQNLRCPR CDSSNTKFCY YNNYNLTQPR HFCKTCRRYW 120 TKGGALRNVP IGGGCRKNKT VSVTSSSGKP SGAAGRLKTV VSSEIGKSTL GLVGGFDQEL 180 PSNPILWASP QNSHLLALLR ANQNPNPNSL TVKEESVMIG SPHMSARALG LNNQVPSIGL 240 CNPFWRSNNQ QQNHQAQVQH HHHHQQNHHQ QQQQQQHNGF VLGEVQNTGI QDLYQRLRPS 300 SVNYYPHHSP VLMSNVGSSS SSSSAILESA PVAAAGELDY WNPTLSWSDL PTTNGAYP

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MFPPLSLSHR SSHNQKRKKK RKRKKKMIQE LLGGGAGLIG ERKISITGVL EGSSPSPSPS  60
SSSPSPSSSA ATTPASSSAP AENQNLRCPR CDSSNTKFCY YNNYNLTQPR HFCKTCRRYW  120
TKGGALRNVP IGGGCRKNKT VSVTSSSGKP SGAAGRLKTV VSSEIGKSTL GLVGGFDQEL  180
PSNPILWASP QNSHLLALLR ANQNPNPNSL TVKEESVMIG SPHMSARALG LNNQVPSIGL  240
CNPFWRSNNQ QQNHQAQVQH HHHHQQNHHQ QQQQQQHNGF VLGEVQNTGI QDLYQRLRPS  300
SVNYYPHHSP VLMSNVGSSS SSSSAILESA PVAAAGELDY WNPTLSWSDL PTTNGAYP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	16	22	KRKKKRK
2	16	24	KRKKKRKRK
3	17	23	KRKKKRK
4	17	25	KRKKKRKRK
5	18	24	KRKKKRK
6	18	26	KRKKKRKRK
7	19	24	KKRKRK
8	19	26	KKRKRKKK
9	19	25	KRKKKRK
10	20	26	KRKKKRK
11	21	25	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	1e-32	Dof family protein