PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028092194.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | Nin-like | ||||||||
Protein Properties | Length: 470aa MW: 52552.4 Da PI: 6.941 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 56.6 | 5.1e-18 | 283 | 329 | 4 | 50 |
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50 +i led+++ +++++dAA +L+v+ ++LKr+CR yGI+RWP R k XP_028092194.1 283 KIALEDIRQSSKMKLEDAAENLQVGKSTLKRACRVYGIDRWPPRITK 329 799***************************************99665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 470 aa Download sequence |
MRLKMKLVLA LDEIKNVLKV VCEVYDLPLA QAWVPCKVGW PCRPLVDGGI LGVSCYYYKH 60 EDKCRDFQYI NSMFHLKNGV GVVGRALSST DMVFCRDVTQ LSLTEYPLAH HARKYGLSDC 120 FAICLQSSCT ENDDYVLEFF LPVSNETNEN PHASLKKILK SMRKDFRTLR VASRKELGED 180 FCIEEIGGEK LDHVQRPQTT ISLPWSEPLQ SEVEVMQVDS SDQQSMNAIN TGSNVGGTER 240 DNIAITCMQE KSTVKASKRK GNKSGGTIKA SEIKGNKSGV KIKIALEDIR QSSKMKLEDA 300 AENLQVGKST LKRACRVYGI DRWPPRITKK SGFSQPNESA LCVDLEQSSQ LNLDDLLFAQ 360 PLASIVHTEP HDTTLQDANV VTIEAKYAKA NAIKFRLSLS SSLIELQQEV AQRLNLEAGT 420 YYVKYKDEDG DLILIACDGD LRDYMCISRL EGKTCIVVLL VPKLPITDHL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64530.1 | 9e-48 | Nin-like family protein |