PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028092193.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 470aa MW: 52552.4 Da PI: 6.941

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028092193.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	56.6	5.1e-18	283	329	4	50
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50 +i led+++ +++++dAA +L+v+ ++LKr+CR yGI+RWP R k XP_028092193.1 283 KIALEDIRQSSKMKLEDAAENLQVGKSTLKRACRVYGIDRWPPRITK 329 799***************************************99665 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MRLKMKLVLA LDEIKNVLKV VCEVYDLPLA QAWVPCKVGW PCRPLVDGGI LGVSCYYYKH 60 EDKCRDFQYI NSMFHLKNGV GVVGRALSST DMVFCRDVTQ LSLTEYPLAH HARKYGLSDC 120 FAICLQSSCT ENDDYVLEFF LPVSNETNEN PHASLKKILK SMRKDFRTLR VASRKELGED 180 FCIEEIGGEK LDHVQRPQTT ISLPWSEPLQ SEVEVMQVDS SDQQSMNAIN TGSNVGGTER 240 DNIAITCMQE KSTVKASKRK GNKSGGTIKA SEIKGNKSGV KIKIALEDIR QSSKMKLEDA 300 AENLQVGKST LKRACRVYGI DRWPPRITKK SGFSQPNESA LCVDLEQSSQ LNLDDLLFAQ 360 PLASIVHTEP HDTTLQDANV VTIEAKYAKA NAIKFRLSLS SSLIELQQEV AQRLNLEAGT 420 YYVKYKDEDG DLILIACDGD LRDYMCISRL EGKTCIVVLL VPKLPITDHL

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MRLKMKLVLA LDEIKNVLKV VCEVYDLPLA QAWVPCKVGW PCRPLVDGGI LGVSCYYYKH  60
EDKCRDFQYI NSMFHLKNGV GVVGRALSST DMVFCRDVTQ LSLTEYPLAH HARKYGLSDC  120
FAICLQSSCT ENDDYVLEFF LPVSNETNEN PHASLKKILK SMRKDFRTLR VASRKELGED  180
FCIEEIGGEK LDHVQRPQTT ISLPWSEPLQ SEVEVMQVDS SDQQSMNAIN TGSNVGGTER  240
DNIAITCMQE KSTVKASKRK GNKSGGTIKA SEIKGNKSGV KIKIALEDIR QSSKMKLEDA  300
AENLQVGKST LKRACRVYGI DRWPPRITKK SGFSQPNESA LCVDLEQSSQ LNLDDLLFAQ  360
PLASIVHTEP HDTTLQDANV VTIEAKYAKA NAIKFRLSLS SSLIELQQEV AQRLNLEAGT  420
YYVKYKDEDG DLILIACDGD LRDYMCISRL EGKTCIVVLL VPKLPITDHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	9e-48	Nin-like family protein