PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028091277.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 639aa MW: 72459.3 Da PI: 7.6849

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028091277.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	40.7	4.5e-13	537	578	4	45
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWP 45 ei l+d+ ++ +++ik AA +L v++++LKriCR+yG+ WP XP_028091277.1 537 EIPLDDILQNSKKSIKVAADNLRVSPSTLKRICRRYGVTSWP 578 688999***********************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 639 aa Download sequence
MAESDGYNSP FDSSSDEEGR RAAISDKERT VAANFPDDFK QFVDTQLNRC PVVDDDCYDK 60 FCGWVFWSRE DDQSEHPPNI SDLKKKIKDV LRKCLLEWFQ NPTLIQFWAP TRTMDGRPYL 120 TTQNQPFALC TLPRRIDDDV KEPVKGLCGY RMISMDYKVY MDRESSDEQL GVPGRVFKHG 180 FREFTPNVEY YSIKEYPLRD QALRCQLKLS WVIPLFDPST HFCVGVLDIV STWPSIGFLL 240 YNNSDCLRML KEEVGLEFSK SHADHVKKRN VRQSEALDEI SKVLKVVCKV HGLDFAQAWA 300 PCRVDWACRA LVKGDIFHVI ANSKALEYWD FEPPNSVSHL RKGQGVVGRA FSSPNVLFCK 360 DVTQLSIIDY PLAHYARYHK LGCCFAICLQ SSCTGNDIYV LECFMPSSNK DYYGNQQTAL 420 RKILETMKKN FRTFKLASGE ELGGHLYIEE IPLQNGEKLD SVQMSQTSKS LPRPEPLQSG 480 GEMTQLDLSN QQPMDALNNE SNVVSAERSN IDVTCSQEKG KTKRPKRVYN RTGVKIEIPL 540 DDILQNSKKS IKVAADNLRV SPSTLKRICR RYGVTSWPPH NKNMVGSSQP SESSPGVDHQ 600 QMPQLSSDQP SSQALAAVVH ANPRSTVIRD ANIVTVKAK

Sequence ? help Back to Top

Protein Sequence Length: 639 aa Download sequence

MAESDGYNSP FDSSSDEEGR RAAISDKERT VAANFPDDFK QFVDTQLNRC PVVDDDCYDK  60
FCGWVFWSRE DDQSEHPPNI SDLKKKIKDV LRKCLLEWFQ NPTLIQFWAP TRTMDGRPYL  120
TTQNQPFALC TLPRRIDDDV KEPVKGLCGY RMISMDYKVY MDRESSDEQL GVPGRVFKHG  180
FREFTPNVEY YSIKEYPLRD QALRCQLKLS WVIPLFDPST HFCVGVLDIV STWPSIGFLL  240
YNNSDCLRML KEEVGLEFSK SHADHVKKRN VRQSEALDEI SKVLKVVCKV HGLDFAQAWA  300
PCRVDWACRA LVKGDIFHVI ANSKALEYWD FEPPNSVSHL RKGQGVVGRA FSSPNVLFCK  360
DVTQLSIIDY PLAHYARYHK LGCCFAICLQ SSCTGNDIYV LECFMPSSNK DYYGNQQTAL  420
RKILETMKKN FRTFKLASGE ELGGHLYIEE IPLQNGEKLD SVQMSQTSKS LPRPEPLQSG  480
GEMTQLDLSN QQPMDALNNE SNVVSAERSN IDVTCSQEKG KTKRPKRVYN RTGVKIEIPL  540
DDILQNSKKS IKVAADNLRV SPSTLKRICR RYGVTSWPPH NKNMVGSSQP SESSPGVDHQ  600
QMPQLSSDQP SSQALAAVVH ANPRSTVIRD ANIVTVKAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	7e-77	Nin-like family protein