PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028091076.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MYB | ||||||||
Protein Properties | Length: 318aa MW: 36318 Da PI: 8.774 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.8 | 5.3e-18 | 107 | 152 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+q+G+ +W++Ia++++ gR++k+c++rw++ XP_028091076.1 107 RGHWRPHEDSKLKELVTQYGPQNWNLIAEKLQ-GRSGKSCRLRWFNQ 152 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 56.3 | 7.6e-18 | 160 | 202 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++++eE+e+l+ a++++G++ W+ Iar ++ gRt++ +k++w+ XP_028091076.1 160 RAFSEEEEERLLAAHRMYGNK-WAMIARLFP-GRTDNAVKNHWHV 202 689******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 318 aa Download sequence |
MNLQHMNSNG AHDINGFRDI NFLIPPPPGQ LSLSMKHLGE RNGYHQILNP PFQNKPWCFA 60 PMEEGSETDD GTDMGSGGID RNGLDLDQGD DEDSIEKKFG RTKLCARGHW RPHEDSKLKE 120 LVTQYGPQNW NLIAEKLQGR SGKSCRLRWF NQLDPRINKR AFSEEEEERL LAAHRMYGNK 180 WAMIARLFPG RTDNAVKNHW HVIMARRHRE QNTVYRRRKP SSCSPKGFDG MIMINGYNNH 240 LNNACSESTI SSANIDESGS TCTDLSLTPS STIVRPGFGF VSRLVSPVLQ HHQPYGLQMG 300 MITFYYLKFY VHKILSQN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17800.1 | 7e-67 | MYB family protein |